View Source aws_omics (aws v1.0.4)
This is the AWS HealthOmics API Reference.
For an introduction to the service, see What is AWS HealthOmics?: https://docs.aws.amazon.com/omics/latest/dev/ in the AWS HealthOmics User Guide.Summary
Functions
Stops a multipart upload.
Accepts a share for an analytics store.
Deletes one or more read sets.
Cancels an annotation import job.
Cancels a run.
Cancels a variant import job.
Concludes a multipart upload once you have uploaded all the components.
Creates an annotation store.
Creates a new version of an annotation store.
Begins a multipart read set upload.
Creates a reference store.
Creates a run group.
Creates a sequence store.
Creates a share offer that can be accepted outside the account by a subscriber.
Creates a variant store.
Creates a workflow.
Deletes an annotation store.
Deletes one or multiple versions of an annotation store.
Deletes a genome reference.
Deletes a genome reference store.
Deletes a workflow run.
Deletes a workflow run group.
Deletes a sequence store.
Deletes a share of an analytics store.
Deletes a variant store.
Deletes a workflow.
Gets information about an annotation import job.
Gets information about an annotation store.
Retrieves the metadata for an annotation store version.
Gets a file from a read set.
Gets information about a read set activation job.
Gets information about a read set export job.
Gets information about a read set import job.
Gets details about a read set.
Gets a reference file.
Gets information about a reference import job.
Gets information about a genome reference's metadata.
Gets information about a reference store.
Gets information about a workflow run.
Gets information about a workflow run group.
Gets information about a workflow run task.
Gets information about a sequence store.
Retrieves the metadata for a share.
Gets information about a variant import job.
Gets information about a variant store.
Gets information about a workflow.
Retrieves a list of annotation import jobs.
Lists the versions of an annotation store.
Retrieves a list of annotation stores.
Lists multipart read set uploads and for in progress uploads.
Retrieves a list of read set activation jobs.
Retrieves a list of read set export jobs.
Retrieves a list of read set import jobs.
This operation will list all parts in a requested multipart upload for a sequence store.
Retrieves a list of read sets.
Retrieves a list of reference import jobs.
Retrieves a list of reference stores.
Retrieves a list of references.
Retrieves a list of run groups.
Retrieves a list of tasks for a run.
Retrieves a list of runs.
Retrieves a list of sequence stores.
Lists all shares associated with an account.
Retrieves a list of tags for a resource.
Retrieves a list of variant import jobs.
Retrieves a list of variant stores.
Retrieves a list of workflows.
Starts an annotation import job.
Activates an archived read set.
Exports a read set to Amazon S3.
Starts a read set import job.
Starts a reference import job.
Starts a workflow run.
Starts a variant import job.
Tags a resource.
Removes tags from a resource.
Updates an annotation store.
Updates the description of an annotation store version.
Updates a run group.
Updates a variant store.
Updates a workflow.
This operation uploads a specific part of a read set.
Functions
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abort_multipart_read_set_upload(Client, SequenceStoreId, UploadId, Input)
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abort_multipart_read_set_upload(Client, SequenceStoreId, UploadId, Input0, Options0)
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complete_multipart_read_set_upload(Client, SequenceStoreId, UploadId, Input)
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complete_multipart_read_set_upload(Client, SequenceStoreId, UploadId, Input0, Options0)
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create_multipart_read_set_upload(Client, SequenceStoreId, Input0, Options0)
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get_annotation_import_job(Client, JobId, QueryMap, HeadersMap, Options0)
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get_annotation_store(Client, Name, QueryMap, HeadersMap, Options0)
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get_annotation_store_version(Client, Name, VersionName, QueryMap, HeadersMap)
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get_annotation_store_version(Client, Name, VersionName, QueryMap, HeadersMap, Options0)
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get_read_set(Client, Id, SequenceStoreId, PartNumber, QueryMap, HeadersMap)
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get_read_set(Client, Id, SequenceStoreId, PartNumber, QueryMap, HeadersMap, Options0)
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get_read_set_activation_job(Client, Id, SequenceStoreId, QueryMap, HeadersMap)
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get_read_set_activation_job(Client, Id, SequenceStoreId, QueryMap, HeadersMap, Options0)
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get_read_set_export_job(Client, Id, SequenceStoreId, QueryMap, HeadersMap)
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get_read_set_export_job(Client, Id, SequenceStoreId, QueryMap, HeadersMap, Options0)
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get_read_set_import_job(Client, Id, SequenceStoreId, QueryMap, HeadersMap)
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get_read_set_import_job(Client, Id, SequenceStoreId, QueryMap, HeadersMap, Options0)
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get_read_set_metadata(Client, Id, SequenceStoreId, QueryMap, HeadersMap)
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get_read_set_metadata(Client, Id, SequenceStoreId, QueryMap, HeadersMap, Options0)
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get_reference(Client, Id, ReferenceStoreId, PartNumber, QueryMap, HeadersMap)
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get_reference(Client, Id, ReferenceStoreId, PartNumber, QueryMap, HeadersMap, Options0)
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get_reference_import_job(Client, Id, ReferenceStoreId, QueryMap, HeadersMap)
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get_reference_import_job(Client, Id, ReferenceStoreId, QueryMap, HeadersMap, Options0)
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get_reference_metadata(Client, Id, ReferenceStoreId, QueryMap, HeadersMap)
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get_reference_metadata(Client, Id, ReferenceStoreId, QueryMap, HeadersMap, Options0)
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get_variant_import_job(Client, JobId, QueryMap, HeadersMap, Options0)
View SourceLists multipart read set uploads and for in progress uploads.
Once the upload is completed, a read set is created and the upload will no longer be returned in the respone.
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list_multipart_read_set_uploads(Client, SequenceStoreId, Input0, Options0)
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list_read_set_activation_jobs(Client, SequenceStoreId, Input0, Options0)
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list_read_set_export_jobs(Client, SequenceStoreId, Input0, Options0)
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list_read_set_import_jobs(Client, SequenceStoreId, Input0, Options0)
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list_read_set_upload_parts(Client, SequenceStoreId, UploadId, Input)
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list_read_set_upload_parts(Client, SequenceStoreId, UploadId, Input0, Options0)
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list_reference_import_jobs(Client, ReferenceStoreId, Input0, Options0)
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list_tags_for_resource(Client, ResourceArn, QueryMap, HeadersMap, Options0)
View SourceActivates an archived read set.
To reduce storage charges, Amazon Omics archives unused read sets after 30 days.
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start_read_set_activation_job(Client, SequenceStoreId, Input0, Options0)
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start_read_set_export_job(Client, SequenceStoreId, Input0, Options0)
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start_read_set_import_job(Client, SequenceStoreId, Input0, Options0)
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start_reference_import_job(Client, ReferenceStoreId, Input0, Options0)
View SourceStarts a workflow run.
To duplicate a run, specify the run's ID and a role ARN. The remaining parameters are copied from the previous run.
The total number of runs in your account is subject to a quota per Region. To avoid needing to delete runs manually, you can set the retention mode toREMOVE
. Runs with this setting are deleted automatically when the run quoata is exceeded.
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update_annotation_store_version(Client, Name, VersionName, Input0, Options0)
View SourceThis operation uploads a specific part of a read set.
If you upload a new part using a previously used part number, the previously uploaded part will be overwritten.
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