View Source AWS.Omics (aws-elixir v1.0.0)
This is the AWS HealthOmics API Reference.
For an introduction to the service, see What is AWS HealthOmics? in the AWS HealthOmics User Guide.
Summary
Functions
Stops a multipart upload.
Accepts a share for an analytics store.
Deletes one or more read sets.
Cancels an annotation import job.
Cancels a run.
Cancels a variant import job.
Concludes a multipart upload once you have uploaded all the components.
Creates an annotation store.
Creates a new version of an annotation store.
Begins a multipart read set upload.
Creates a reference store.
Creates a run group.
Creates a sequence store.
Creates a share offer that can be accepted outside the account by a subscriber.
Creates a variant store.
Creates a workflow.
Deletes an annotation store.
Deletes one or multiple versions of an annotation store.
Deletes a genome reference.
Deletes a genome reference store.
Deletes a workflow run.
Deletes a workflow run group.
Deletes a sequence store.
Deletes a share of an analytics store.
Deletes a variant store.
Deletes a workflow.
Gets information about an annotation import job.
Gets information about an annotation store.
Retrieves the metadata for an annotation store version.
Gets a file from a read set.
Gets information about a read set activation job.
Gets information about a read set export job.
Gets information about a read set import job.
Gets details about a read set.
Gets a reference file.
Gets information about a reference import job.
Gets information about a genome reference's metadata.
Gets information about a reference store.
Gets information about a workflow run.
Gets information about a workflow run group.
Gets information about a workflow run task.
Gets information about a sequence store.
Retrieves the metadata for a share.
Gets information about a variant import job.
Gets information about a variant store.
Gets information about a workflow.
Retrieves a list of annotation import jobs.
Lists the versions of an annotation store.
Retrieves a list of annotation stores.
Lists multipart read set uploads and for in progress uploads.
Retrieves a list of read set activation jobs.
Retrieves a list of read set export jobs.
Retrieves a list of read set import jobs.
This operation will list all parts in a requested multipart upload for a sequence store.
Retrieves a list of read sets.
Retrieves a list of reference import jobs.
Retrieves a list of reference stores.
Retrieves a list of references.
Retrieves a list of run groups.
Retrieves a list of tasks for a run.
Retrieves a list of runs.
Retrieves a list of sequence stores.
Lists all shares associated with an account.
Retrieves a list of tags for a resource.
Retrieves a list of variant import jobs.
Retrieves a list of variant stores.
Retrieves a list of workflows.
Starts an annotation import job.
Activates an archived read set.
Exports a read set to Amazon S3.
Starts a read set import job.
Starts a reference import job.
Starts a workflow run.
Starts a variant import job.
Tags a resource.
Removes tags from a resource.
Updates an annotation store.
Updates the description of an annotation store version.
Updates a run group.
Updates a variant store.
Updates a workflow.
This operation uploads a specific part of a read set.
Functions
abort_multipart_read_set_upload(client, sequence_store_id, upload_id, input, options \\ [])
View SourceStops a multipart upload.
batch_delete_read_set(client, sequence_store_id, input, options \\ [])
View SourceDeletes one or more read sets.
cancel_annotation_import_job(client, job_id, input, options \\ [])
View SourceCancels an annotation import job.
Cancels a run.
Cancels a variant import job.
complete_multipart_read_set_upload(client, sequence_store_id, upload_id, input, options \\ [])
View SourceConcludes a multipart upload once you have uploaded all the components.
Creates an annotation store.
create_annotation_store_version(client, name, input, options \\ [])
View SourceCreates a new version of an annotation store.
create_multipart_read_set_upload(client, sequence_store_id, input, options \\ [])
View SourceBegins a multipart read set upload.
Creates a reference store.
Creates a run group.
Creates a sequence store.
Creates a variant store.
Creates a workflow.
Deletes an annotation store.
delete_annotation_store_versions(client, name, input, options \\ [])
View SourceDeletes one or multiple versions of an annotation store.
delete_reference(client, id, reference_store_id, input, options \\ [])
View SourceDeletes a genome reference.
Deletes a genome reference store.
Deletes a workflow run.
Deletes a workflow run group.
Deletes a sequence store.
Deletes a variant store.
Deletes a workflow.
Gets information about an annotation import job.
Gets information about an annotation store.
get_annotation_store_version(client, name, version_name, options \\ [])
View SourceRetrieves the metadata for an annotation store version.
get_read_set(client, id, sequence_store_id, file \\ nil, part_number, options \\ [])
View SourceGets a file from a read set.
get_read_set_activation_job(client, id, sequence_store_id, options \\ [])
View SourceGets information about a read set activation job.
get_read_set_export_job(client, id, sequence_store_id, options \\ [])
View SourceGets information about a read set export job.
get_read_set_import_job(client, id, sequence_store_id, options \\ [])
View SourceGets information about a read set import job.
get_read_set_metadata(client, id, sequence_store_id, options \\ [])
View SourceGets details about a read set.
get_reference(client, id, reference_store_id, file \\ nil, part_number, range \\ nil, options \\ [])
View SourceGets a reference file.
get_reference_import_job(client, id, reference_store_id, options \\ [])
View SourceGets information about a reference import job.
get_reference_metadata(client, id, reference_store_id, options \\ [])
View SourceGets information about a genome reference's metadata.
Gets information about a reference store.
Gets information about a workflow run.
Gets information about a workflow run group.
Gets information about a workflow run task.
Gets information about a sequence store.
Gets information about a variant import job.
Gets information about a variant store.
get_workflow(client, id, export \\ nil, type \\ nil, options \\ [])
View SourceGets information about a workflow.
Retrieves a list of annotation import jobs.
list_annotation_store_versions(client, name, input, options \\ [])
View SourceLists the versions of an annotation store.
Retrieves a list of annotation stores.
list_multipart_read_set_uploads(client, sequence_store_id, input, options \\ [])
View SourceLists multipart read set uploads and for in progress uploads.
Once the upload is completed, a read set is created and the upload will no longer be returned in the response.
list_read_set_activation_jobs(client, sequence_store_id, input, options \\ [])
View SourceRetrieves a list of read set activation jobs.
list_read_set_export_jobs(client, sequence_store_id, input, options \\ [])
View SourceRetrieves a list of read set export jobs.
list_read_set_import_jobs(client, sequence_store_id, input, options \\ [])
View SourceRetrieves a list of read set import jobs.
list_read_set_upload_parts(client, sequence_store_id, upload_id, input, options \\ [])
View SourceThis operation will list all parts in a requested multipart upload for a sequence store.
Retrieves a list of read sets.
list_reference_import_jobs(client, reference_store_id, input, options \\ [])
View SourceRetrieves a list of reference import jobs.
Retrieves a list of reference stores.
Retrieves a list of references.
list_run_groups(client, max_results \\ nil, name \\ nil, starting_token \\ nil, options \\ [])
View SourceRetrieves a list of run groups.
list_run_tasks(client, id, max_results \\ nil, starting_token \\ nil, status \\ nil, options \\ [])
View SourceRetrieves a list of tasks for a run.
list_runs(client, max_results \\ nil, name \\ nil, run_group_id \\ nil, starting_token \\ nil, status \\ nil, options \\ [])
View SourceRetrieves a list of runs.
Retrieves a list of sequence stores.
Retrieves a list of tags for a resource.
Retrieves a list of variant import jobs.
Retrieves a list of variant stores.
list_workflows(client, max_results \\ nil, name \\ nil, starting_token \\ nil, type \\ nil, options \\ [])
View SourceRetrieves a list of workflows.
Starts an annotation import job.
start_read_set_activation_job(client, sequence_store_id, input, options \\ [])
View SourceActivates an archived read set.
To reduce storage charges, Amazon Omics archives unused read sets after 30 days.
start_read_set_export_job(client, sequence_store_id, input, options \\ [])
View SourceExports a read set to Amazon S3.
start_read_set_import_job(client, sequence_store_id, input, options \\ [])
View SourceStarts a read set import job.
start_reference_import_job(client, reference_store_id, input, options \\ [])
View SourceStarts a reference import job.
Starts a workflow run.
To duplicate a run, specify the run's ID and a role ARN. The remaining parameters are copied from the previous run.
The total number of runs in your account is subject to a quota per Region. To
avoid
needing to delete runs manually, you can set the retention mode to REMOVE
.
Runs with this setting are deleted automatically when the run quoata is
exceeded.
Starts a variant import job.
Tags a resource.
Removes tags from a resource.
Updates an annotation store.
update_annotation_store_version(client, name, version_name, input, options \\ [])
View SourceUpdates the description of an annotation store version.
Updates a run group.
Updates a variant store.
Updates a workflow.
upload_read_set_part(client, sequence_store_id, upload_id, input, options \\ [])
View SourceThis operation uploads a specific part of a read set.
If you upload a new part using a previously used part number, the previously uploaded part will be overwritten.